Title: Transcriptomics-based screening of molecular signatures associated with patients overall survival and their key regulators in subtypes of breast cancer
Supplementary_File_2:Her2_candidate_prognostic_markers
GeneName	GSE10886_logFC	GSE26304_logFC	GSE59246_logFC	HR	HR_Lower	HR_Higher
EMP2	0.867	0.798	0.789	1.86	1.17	2.96
UBFD1	0.877	1.367	0.991	1.85	1.16	2.94
VEGFA	1.154	1.403	1.11	1.84	1.24	2.71
HM13	0.928	0.763	0.828	1.83	1.15	2.91
MLPH	0.626	1.517	2.23	1.72	1.16	2.53
ACTR3	1.137	0.849	1.39	1.7	1.07	2.72
GPRC5A	0.824	2.52	1.67	1.66	1.13	2.45
ZNF217	0.796	0.832	0.77	1.64	1.11	2.42
COMTD1	1.198	0.829	1.74	1.61	1.02	2.54
HMGB3	1.796	1.086	2.62	1.59	1.01	2.52
MMP11	4.292	3.931	5.12	1.59	1.08	2.35
PYCR1	1.054	1.153	1.04	1.59	1.08	2.35
TDG	0.7	0.906	0.74	1.59	1.08	2.35
ATP2C2	1.278	1.304	4.66	1.57	1.07	2.32
CIB1	0.746	0.646	1.07	1.57	1.07	2.32
HIST1H2BC	0.848	0.894	1.5	1.56	1.06	2.3
IL13RA1	1.148	1.095	0.955	1.54	1.05	2.28
TUBB3	1.561	2.064	5.03	1.54	1.04	2.27
C1QTNF3	1.362	1.23	1.31	1.53	1.04	2.26
STARD3	1.761	1.535	3.14	1.53	1.04	2.25
RACGAP1	1.493	1.186	1.2	1.51	1.03	2.22
ARPC3	1.116	0.642	0.843	1.5	1.01	2.2
ATOX1	1.071	0.63	0.851	1.49	1.01	2.2
MEOX1	-1.354	-1.414	-2.18	0.68	0.46	1
RNF186	-0.973	-2.142	-4.92	0.67	0.45	0.98
CHPT1	-1.079	-1.423	-1.77	0.66	0.45	0.97
LTBP4	-1.356	-0.775	-1.06	0.66	0.45	0.98
MAP2K6	-0.808	-1.479	-1.51	0.66	0.45	0.97
ACADS	-0.675	-1.317	-2.77	0.65	0.44	0.96
ALDOC	-0.995	-0.735	-1.96	0.64	0.44	0.95
PPAP2B	-1.114	-0.881	-1.74	0.64	0.43	0.94
BMX	-0.761	-0.85	-2.08	0.63	0.42	0.92
FIGF	-2.704	-4.021	-4.92	0.63	0.42	0.92
GLT25D2	-1.12	-0.71	-2.18	0.62	0.42	0.92
HOXA4	-2.028	-1.647	-2.84	0.62	0.42	0.91
IL17RD	-0.688	-1.891	-2.12	0.62	0.39	0.98
SLC41A3	-0.701	-0.666	-0.904	0.62	0.42	0.92
TMEM35	-0.753	-0.788	-1.5	0.62	0.42	0.92
TSHZ2	-2.049	-2.028	-2.33	0.62	0.39	0.98
BNC1	-1.001	-1.467	-3.49	0.61	0.41	0.9
BOC	-1.259	-1.391	-2.06	0.61	0.38	0.96
FAM107A	-1.796	-2.134	-2.47	0.61	0.42	0.9
ITGB8	-0.797	-2.043	-1.66	0.61	0.39	0.97
CA4	-1.593	-1.335	-5.94	0.6	0.41	0.89
DAGLA	-0.816	-0.858	-1.57	0.6	0.41	0.89
HMBOX1	-1.291	-0.872	-1.4	0.6	0.38	0.96
KIT	-4.762	-3.863	-4.64	0.6	0.4	0.88
RPL10A	-1.138	-0.698	-1.08	0.6	0.38	0.96
IGFBP6	-1.432	-1.615	-2.74	0.59	0.4	0.87
RGN	-0.978	-2.339	-2.86	0.59	0.4	0.87
ADHFE1	-0.859	-1.051	-1.56	0.58	0.37	0.92
ARHGEF10	-1.09	-0.957	-0.896	0.58	0.39	0.86
C12orf24	-0.681	-0.827	-0.95	0.58	0.39	0.85
RYR3	-1.283	-0.772	-2.08	0.58	0.39	0.86
SMR3B	-0.91	-1.57	-3.74	0.58	0.39	0.86
ZBTB44	-0.627	-1.399	-0.876	0.58	0.37	0.92
ACTR3B	-0.965	-1.287	-1.48	0.57	0.38	0.84
CSN2	-1.372	-0.604	-11.1	0.57	0.38	0.84
C4BPA	-1.043	-0.972	-3.23	0.56	0.38	0.84
CDK6	-1.003	-0.749	-0.828	0.56	0.35	0.88
CSN3	-1.309	-0.806	-9.6	0.56	0.37	0.83
ARHGEF6	-0.964	-1.328	-1.81	0.55	0.37	0.82
BEGAIN	-1.34	-1.39	-1.15	0.55	0.37	0.81
C1QTNF9	-0.897	-0.656	-2.74	0.53	0.33	0.84
KLHL29	-2.908	-1.975	-1.34	0.51	0.32	0.81
SAA4	-1.964	-2.111	-2.92	0.51	0.34	0.76
EFCAB1	-1.157	-2.37	-1.72	0.48	0.32	0.71
GALT	-0.775	-0.92	-1.04	0.46	0.31	0.68
CMTM7	-2.084	-1.784	-2.01	0.4	0.25	0.64