2026-10-15T09:57:05Z https://data.mendeley.com/oai

oai:data.mendeley.com/xgxvt8sjr9.1 2025-12-11T00:30:28Z

Domínguez Pérez, Dany FiltDeTox classification of toxin candidates in the paired-end transcriptome of the false black coral Savalia savaglia Mendeley Data This dataset contains the outputs of FiltDeTox, a rule-based post-processing framework built on top of DeTox, applied to the paired-end transcriptome of the false black coral Savalia savaglia. Starting from DeTox results, FiltDeTox combines DeTox flags (Rating), secretion predictions (WoLFPSort), HMMER-based mapping to VenomZone toxin families, Pfam toxin domains and toxin-related keywords to classify each ORF into four categories: Toxins-Candidates, Unlikely-Toxins, SCRs-WA (secreted cysteine-rich sequences with weak/absent annotation) and Non-Toxins. The dataset provides: • Full_Classified_Data.tsv: complete table with all DeTox ORFs, annotations and the FiltDeTox_Classification column. • Four per-class tables (Toxins_Candidates.tsv, Unlikely_Toxins.tsv, SCRs_WA.tsv, Non_Toxins.tsv) plus FiltDeTox_Stats.tsv summarising ORF counts per class. • Per-class mature and precursor FASTA files (…_mature.fasta and …_precursor.fasta) for all four categories. • Per-class “full-length” TSVs (…_full-length.tsv), precursor FASTA files restricted to complete sequences (…_precursor_full-length-seqs.fasta) and small stats files (…_full-length_stats.txt). • Pfam_Domain_Summary_with_ORFs_Genes.tsv: domain-wise summary for Toxins-Candidates, including numbers of ORFs/transcripts/genes, total TPM and associated IDs. • Plot files (PNG and PDF): stacked barplots for FiltDeTox classes and DeTox flags, nested pie charts combining classes and flags, a pie chart of flags within Toxins-Candidates, and a combined dendrogram + dot plot of Pfam domains and their ORF/TPM profiles. These files provide a classified and sequence-resolved view of the DeTox-derived toxin landscape in Savalia savaglia, ready for downstream comparative and functional analyses. Transcriptomics Protein Annotation Leone, Serena Modica, Maria Vittoria Dataset doi:10.17632/xgxvt8sjr9.1 oai:data.mendeley.com/xgxvt8sjr9.1 Creative Commons Attribution 4.0 International http://creativecommons.org/licenses/by/4.0 https://data.mendeley.com/datasets/xgxvt8sjr9 2025-12-11T00:30:28Z