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Variant call file of DENV2 16681 passage 1 in M3 iPSC cells (open with Microsoft Excel)
Data Types:
  • Sequencing Data
  • Dataset
This data includes all the input data for the test instances used in the experiments. The input data consists of three sets of benchmarks including OR-Lib set (40 graphs), TSP-Lib set (20 graphs) and University of Florida Sparse Matrix Collection (3 graphs) .
Data Types:
  • Dataset
  • Text
  • Audio
These files contained lab notes on the preparation of hot-pressed plant-based biopolymers and, raw, filtered and analyzed data on bending properties, thermal and structural analysis.
Data Types:
  • Other
  • Software/Code
  • Image
  • Tabular Data
  • Dataset
  • Text
The Indeterminate Domain (IDD) proteins are a plant specific subclass of C2H2 Zinc Finger transcription factors. Some of these transcription factors play roles in diverse aspects of plant metabolism and development; however the function of most of IDDs is unknown and its molecular evolution has not been explored. Here, Prochetto and Reinheimer reconstructed the evolution of IDDs during plant land conquest. They found that IDDs arose from the common ancestor of Streptophyta. Once in land, IDDs experienced a rapid radiation that accompanied key morphological, physiological and biochemical transitions required in plant terrestrialization. The authors present a solid phylogenetic framework of annotated IDD genes which links genetic and functional knowledge from model to non-model species.
Data Types:
  • Other
  • Sequencing Data
  • Tabular Data
  • Dataset
  • Text
The procreative statistical framework of musical note structures produces a crucial role in multimedia music classification and reconstruction strategies. Another most significant thing for harmonious music composition is the rhythmic structures that provide musical performance in a harmonic form. This paper has illustrated computational music theory and allied factors to regulate what human beings can acquire, remember, and reconstruct music for sustaining intangible cultural heritage. The music strings or symbols are also imperative factors that assist the musicians as performance guidelines. To afford a syntactic outline of musical note arrangements, a stochastic model along with probabilistic context-free music grammar has been illustrated in this paper. The state transition analysis has also been incorporated in terms of transition table and diagram to demonstrate which state can move to the other one within a finite automaton depending on the behaviors of the current state and associated transition rule. Petri net has been used for modeling and simulating the projected complex music composition framework to analyze system performances. The Petri net simulation-based reachability and system efficiency have been evaluated for analyzing the effectiveness of the proposed event-driven architecture. For incorporating real data into the projected framework, the music composition and reconstruction tool has also been demonstrated. The system performance evaluation metric has shown that around 92% efficiency level has been achieved by analyzing the projected music composition model.
Data Types:
  • Tabular Data
  • Dataset
  • Document
  • Audio
Julia code used to simulate the data presented in "Surface Temperature Estimation in Determined Multi-Wavelength Pyrometry Systems"
Data Types:
  • Other
  • Dataset
This datasets contains the model output at 8 assimilation cycles, only mean background or mean analysis in both assimilation Experiments (Exp_all, Exp_b) are uploaded. Exp_all/analysis: the mean analysis of Exp_all Exp_all/background: the mean background of Exp_all Exp_b/analysis: the mean analysis of Exp_b Exp_b/background: the mean background of Exp_b
Data Types:
  • Other
  • Dataset
RNA sequencing data to Identify DEGs in control EBs and EBs irradiated at 630 nm. RNA-seq raw data 1. Control EBs - read1 & read2 (fq.gz) 2. EBs irradiated at 630 nm - read1 & read2 (fq.gz) RNA-seq raw data of this study are available at other drive (https://drive.google.com/open?id=1JJP4eRvW0r4ZviSvGQJOJKD2eb4_J6os).
Data Types:
  • Other
  • Dataset
Homer Legacy software is a well-known software for simulation of small hybrid energy systems that can be used for both design and research. This dataset is a set of files generated by Homer Legacy bringing the simulation results of hybrid energy systems over the last seven years, as a consequence of the research work led by Dr. Alexandre Beluco, Federal University of Rio Grande do Sul, in southern Brazil. This dataset is being published in conjunction with a paper in Data Science Journal, which presents further explanations about the hybrid energy systems that were simulated and the papers that publish and discuss the results. The readme.pdf file included in this dataset and the associated article provide more details. These files are made available both for their educational nature, as case studies, and for the possibilities of research that can always be opened from the dissemination of research data. The next steps of this research point to the study of the influence of energetic complementarity on the performance of hybrid systems and to the study of hybrid systems equipped with hybrid storage,
Data Types:
  • Other
  • Dataset
  • Document
Data from: Bitomský M., Mládková P., Pakeman RJ, & Duchoslav M. (2020). Clade composition of a plant community indicates its phylogenetic diversity. Ecology and Evolution. doi: 10.1002/ece3.6170 Data summarises results from the case studies and simulations presented in our paper. In addition, we provide an R script for calculation of proposed phylogenetic diversity metrics (the clade indices). Brief description of each file: 1. Grasslands_DNA_markers_info.xls - Accession numbers of all DNA markers used for phylogeny inference in grasslands 2. Grasslands_DNA_alignment_BEFORE_GBlocks.fasta - DNA alignment matrix before utilisation of the GBlocks tool 3. Grasslands_DNA_alignment_AFTER_GBlocks.fasta - DNA alignment matrix after utilisation of the GBlocks tool 4. Grasslands_BEAST_file.xml - BEAST .xml file submitted to the CIPRES portal (www.phylo.org) 5. Grasslands_tree.txt - Dated MCC tree, grasslands (newick format) 6. Grasslands_tree.nex - Dated MCC tree, grasslands (nexus format) 7. Phyto-database_pruned_tree.txt - Pruned dated tree from the super tree of European flora (Durka & Michalski 2012, Ecology), phytosociological database (newick format) 8. Plot_data.slx - plot data of all case studies + species lists 9. Simulation_results.txt - Summary of R2 values (phylogeny-based metric ~ the clade index) for simulated phylogenies and community matrices (manipulated: phylogenetic scale, species pool size and species richness range) 10. Bitomsky2020EE_R_script_indices.R - An R script for computation of the clade indices (with notes and examples)
Data Types:
  • Software/Code
  • Sequencing Data
  • Tabular Data
  • Dataset
  • Document
  • Text