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  • This is the initial release
    Data Types:
    • Software/Code
  • This R package provides helpers for splitting, de-compressing and parsing OpenAIRE Research Graph dumps, a big scholarly data dump comprising metadata about various kinds of grant-supported research outputs, as well as the relationships between them. The package targets users who wish to conduct their own analysis using the OpenAIRE Research Graph, but are wary of handling its large data dumps.
    Data Types:
    • Software/Code
  • First official release of CELLector R package plus amended interactive vignette, now including pointer to CELLector App tutorial
    Data Types:
    • Software/Code
  • //********************************************************************************* // // THIS PROGRAM IMPLEMENTS A 1D VERSION OF THE MASTER EQUATION FOR HEAVY // QUARKONIUM DERIVED BY Y. AKAMATSU IN // // ``Heavy quark master equations in the Lindblad form at high temperatures,'' // Phys. Rev. D 91, no. 5, 056002 (2015) // doi:10.1103/PhysRevD.91.056002 // [arXiv:1403.5783 [hep-ph]]. // // ON THE LEVEL OF THE DENSITY MATRIX AND INCLUDES FULL DISSIPATIVE EFFECTS. // THE SAME EQUATION OF MOTION HAS BEEN APPROXIMATELY UNRAVELLED VIA QUANTUM // STATE DIFFUSION IN // // T. Miura, Y. Akamatsu, M. Asakawa and A. Rothkopf, // ``Quantum Brownian motion of a heavy quark pair in the quark-gluon plasma,'' // Phys. Rev. D 101, no.3, 034011 (2020) // doi:10.1103/PhysRevD.101.034011 // [arXiv:1908.06293 [nucl-th]]. // // This code deploys a novel discrete finite difference operator, specifically // designed to guarantee the trace conservation of the Lindblad dynamics // called a reparametrization neutral summation-by-parts operator. Its derivation // is outlined in an upcoming joint publication // // O.Ålund, Y. Akamatsu, F. Laurén, T. Miura, J. Nordström and A. Rothkopf // ``Trace preserving quantum dynamics using a novel reparametrization-neutral // summation-by-parts difference operator.'' // // CODE AUTHOR: Dr. Alexander Karl Rothkopf DATE: April 4th 2020 // //********************************************************************************* # ================================================================== # In order to compile the different source code files you need to # install the PETSC and SLEPC library # from https://www.mcs.anl.gov/petsc/ (tested on v.3.12) # and from https://slepc.upv.es (tested on v.3.12) # respectively. The Makefile requires that the environment variables # PETSC_DIR, PETSC_ARCH and SLEPC_DIR are set accordingly. The values # currently used in the Makefile thus need to be adjusted. # # The Lindblad dynamics code allows the user to compute the eigen- # functions of the Hamiltonian directly without resorting to a # distributed solver, which furthermore requires the EIGEN library to # be present, which can be found at # http://eigen.tuxfamily.org/ (tested on v.3.3.7) # Please adjust the EIGENPATH environmental variable accordingly. # # MasterPETSC1DxyNewD: Lindblad dynamics with RN-SBP operator # # run the program via example script file # FLB_1D_PETSC_XY_DEBYE_TM_T01_IC0.scr # # MasterPETSC1DxyNaiveD: Lindblad dynamics with naive operator # # run the program via example script file # FLB_1D_PETSC_XY_DEBYE_TM_T01_IC0_NAIVED.scr # # EigenStates1DNewD: Distributed computation of Eigenstates of # the Hamiltonian to be used in the Lindblad # dynamics as initial conditions and/or in # order to compute density matrix in the # state basis. # run the program as mpirun -n #nodes EigenStates1DNewD.run # ==================================================================
    Data Types:
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    • File Set
  • Prunus DNA analysis lab and field protocols
    Data Types:
    • Software/Code
  • Stan-based library for OCT signals analysis
    Data Types:
    • Software/Code
  • First release coinciding with publication of JCP article.
    Data Types:
    • Software/Code
  • Polyhedra v0.6.2 Diff since v0.6.1 Closed issues: sorry wrong place (#202) Merged pull requests: CompatHelper: bump compat for "GeometryTypes" to "0.8" (#201) (@github-actions[bot]) CompatHelper: bump compat for "RecipesBase" to "1.0" (#203) (@github-actions[bot])
    Data Types:
    • Software/Code
  • intermediate_residuals() added to rtplots allows analyzing residual-development during fit-procedure with 2D or 3D plots fixed issues with unsorted (manual) parameter-groupings add possibility to use the dataset-index or the group-index in printsig0analysis add public method calc_model() as wrapper of _calc_model that directly returns a pandas.DataFrame get zenodo DOI and automatically deploy releases to pypi.org
    Data Types:
    • Software/Code
  • This is the version submitted for peer review @ Global Biogeochemical Cycles with the following title and author list. If peer review requires changes to the preformed properties then there will be a version 1.1 and the DOI will be updated in the manuscript. Title: Preformed properties for marine organic matter and carbonate mineral cycling quantification Authors: Carter, B. R.1,2, Feely, R. A.2, Lauvset, S.K.3, Olsen, A.4, DeVries, T.5, Sonnerup, R.1, 1Joint Institute for the Study of the Atmosphere and Ocean, University of Washington, 3737 Brooklyn Ave., Seattle, WA, 98125 2Pacific Marine Environmental Laboratory, National Oceanic and Atmospheric Administration, 7600 Sand Point Way NE, Seattle, WA, 98115 3NORCE Norwegian Research Centre, Bjerknes Centre for Climate Research, Jahnebakken 5, 5007 Bergen, Norway 4Geophysical Institute, University of Bergen and Bjerknes Centre for Climate Research, Allégaten 70, 5007 Bergen, Norway 5Department of Geography and Earth Research Institute, University of California, Santa Barbara, CA 93106
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