Data for manuscript: Effects of functional phylogeny of light-response-related orthologous genes on seedling survival in a subtropical forest

Published: 10 January 2023| Version 2 | DOI: 10.17632/3zj5kp94d2.2
Contributors:
Hui Shang,
Yunquan Wang,
Baocai Han,
Xiangcheng Mi,
Lei Chen,
Yu Liang,
Keping Ma

Description

This package contains data from: Hui Shang, Yunquan Wang, Baocai Han, Xiangcheng Mi, Lei Chen, Yu Liang, Keping Ma Effects of functional phylogeny of light-response-related orthologous genes on seedling survival in a subtropical forest There are four data files (in csv format) that were used in the analyses of the above-mentioned publication. The structures of the data files are listed below with detailed descriptions of their contents. 01_seeding_neighborhood_variables_light_OTH0393.csv: 'data.frame': 20224 obs. of 16 variables 02_seeding_neighborhood_variables_light_OTH1734.csv: 'data.frame': 20224 obs. of 16 variables 03_seeding_neighborhood_variables_light_OTH3979.csv: 'data.frame': 20224 obs. of 16 variables 04_seeding_neighborhood_variables_light_OTH5329csv: 'data.frame': 20224 obs. of 16 variables YEAR: the year recorded the focal seedling. TRAP: the trap where the focal seedling located in. PLOT:the plot where the focal seedling located in. PLOTID: the plot ID named after the trap. TAG: the tag labeled the focal seedling IDSEEDL: the ID of the focal seedling named after the trap, the plot and the tag. fSPCODE: species code of the focal seedling. SPNAME: Chinese name of the focal seedling. HT: height of the focal seedling. SUR1y: alive(1) or dead (0) of the focal seedling after one year. seedl.constd: the standardized number of conspecific seedlings. BA.constd: the standardized basal area of conspecific adults. sAPDstd: the standardized average phylogenetic distance for neighbor seedlings. sNTPDstd: the standardized nearest taxon phylogenetic distance for neighbor seedlings. aAPDstd: the standardized average phylogenetic distance for neighbor adults. aNTPDstd: the standardized nearest taxon phylogenetic distance for neighbor adults.

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Community Ecology

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