RNAseq analysis of rodent spaceflight experiments is confounded by sample collection techniques

Name: RNAseq analysis of rodent spaceflight experiments is confounded by sample collection techniques
Creator: San-Huei Lai Polo
Published: 2020-11-25T19:12:52.090Z
Keywords: Mouse, RNA Sequencing, Liver, Muscle, Spacecraft, Euthanasia, Space Sciences

Lai Polo, San-Huei; Saravia-Butler, Amanda; Boyko, Valery; Dinh, Marie; Chen, Yi-Chun; Fogle, Homer; Reinsch, Sigrid; Ray, Shayoni; Chakravarty, Kaushik; Marcu, Oana; Chen, Rick; Costes, Sylvain; Galazka, Jonathan

doi:10.17632/5hzrgfgxct.1

RNAseq analysis of rodent spaceflight experiments is confounded by sample collection techniques

Published: 25-11-2020| Version 1 | DOI: 10.17632/5hzrgfgxct.1

Contributors:

San-Huei Lai Polo,

Amanda Saravia-Butler,

Valery Boyko,

Marie Dinh,

Yi-Chun Chen,

Homer Fogle,

Sigrid Reinsch,

Shayoni Ray,

Kaushik Chakravarty,

Oana Marcu,

Rick Chen,

Sylvain Costes,

Jonathan Galazka

Description

Differential gene expression (DGE), gene set enrichment (GSEA), principal component, gene body coverage, and other datasets used to investigate the role of sample preservation protocols used on the International Space Station (ISS) on gene-expression data from mouse livers and quadriceps.

RNAseq analysis of rodent spaceflight experiments is confounded by sample collection techniques

Description

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