Supplementary files of 'Development of SNP markers for the autotetraploid Scaphirhynchus sturgeons (Acipenseriformes)'

Published: 11 July 2022| Version 2 | DOI: 10.17632/77z94jv27v.2
Tao Zhou, Junman Huang, Casey Dillman, You He, Chenhong Li


Supplementary Information 1. Conserved loci from reference species Acipenser ruthenus and Polyodon spathula. Sequences of Conserved single-copy loci: conserved_single-copy_loci.fa Sequences of Conserved double-copy loci: conserved_double-copy_loci.fa 2. Consensus sequences caculated from four individuals of Scaphirhynchus (one specimen of S. albus, two specimens of S. platorynchus and one specimen of S. suttkusi) at conserved single-copy and double-copy loci. Sequences of consensus at conserved single-copy loci: consensus-conserved_single-copy_loci.fa Sequences of consensus at conserved double-copy loci: consensus-conserved_double-copy_loci.fa 3. Filtered vcf files of screened SNPs at conserved single-copy and double-copy loci. Screened SNPs at conserved single-copy loci: single-copy_loci.snp.filtered Screened SNPs at conserved double-copy loci: double-copy_loci.snp.filtered



Shanghai Ocean University


Single Nucleotide Polymorphism