Genetic (AFLPs, nuclear genes) datasets of the western Balkan endemic Alyssum austrodalmaticum (Brassicaceae) and relatives

Published: 5 December 2019| Version 1 | DOI: 10.17632/7b67x9wnbd.1
Contributor:
Judita Zozomová

Description

CHSexon2_alignment_A_austrodalmaticum.nex: Sequence alignment of the nuclear low-copy CHS gene (exon 2) of Alyssum austrodalmaticum and related taxa in the nexus format. DET_alignment_A_austrodalmaticum.nex: Sequence alignment of a fragment of the nuclear low-copy DET1 gene of Alyssum austrodalmaticum and related taxa in the nexus format, including indel coding (15 binary gap characters appended to the nucleotide alignment). AFLP_dataset_A_austrodalmaticum.txt: Matrix of AFLP markers scored in 132 individuals of Alyssum austrodalmaticum. AFLP_dataset_A_austrodalmaticum_in_silico_alloN2xS2x.txt: Matrix of AFLP markers scored in 132 individuals of Alyssum austrodalmaticum and 60 artificial, in silico generated pseudo-individuals under the allopolyploidy scenario of N2x x S2x. AFLP_dataset_A_austrodalmaticum_in_silico_autoN2x.txt: Matrix of AFLP markers scored in 132 individuals of Alyssum austrodalmaticum and 60 artificial, in silico generated pseudo-individuals under the autopolyploidy scenario of N2x. AFLP_dataset_A_austrodalmaticum_in_silico_autoS2x.txt: Matrix of AFLP markers scored in 132 individuals of Alyssum austrodalmaticum and 60 artificial, in silico generated pseudo-individuals under the autopolyploidy scenario of S2x. AFLP_dataset_A_austrodalmaticum_in_silico_alloS2xC4x.txt: Matrix of AFLP markers scored in 132 individuals of Alyssum austrodalmaticum and 60 artificial, in silico generated pseudo-individuals under the allopolyploidy scenario of S2x x C4x.

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Categories

DNA Sequencing, Amplified Fragment Length Polymorphism, Genetic Diversity

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