Dataset: Genome-wide phylogeography reveals cryptic speciation in a circumglobal planktonic calcifier: Limacina bulimoides

Published: 20 March 2023| Version 1 | DOI: 10.17632/7m86twnzp2.1
Contributors:
Le Qin Choo, Giada Spagliardi, Milan Malinsky, Marvin Choquet, Erica Goetze, Galice Hoarau, Katja T.C.A. Peijnenburg

Description

1. Modifications to DNA extraction and target capture protocols for assessing genome-wide variation in a global dataset of the pteropod Limacina bulimoides 2. VCF file for hard-filtered target capture dataset of 161 L. bulimoides (for all analyses except SNAPP phylogeny) 3. VCF file for hard-filtered target capture dataset of 161 L. bulimoides and 11 L. trochiformis (for SNAPP phylogeny) 4. Bed file of coordinates of Target capture probes that where >80% of the probe was mapped with coverage >15X

Files

Institutions

Universiteit van Amsterdam, Naturalis Nationaal Natuurhistorisch Museum

Categories

Genomics, Population Genetics, Extraction Methods

Funding

Nederlandse Organisatie voor Wetenschappelijk Onderzoek

016.161.351

National Science Foundation

OCE-1029478, OCE-1338959

Licence