ShinyFMBN, a Shiny app to access FoodMicrobionet
Published: 11 July 2025| Version 11 | DOI: 10.17632/8fwwjpm79y.11
Contributor:
Eugenio ParenteDescription
This data set contains the ShinyFMBN app and the FoodMicrobionet database v5.1.1 The ShinyFMBN app allows you to access FoodMicrobionet 5, a repository of data on food microbiome studies including data for both bacteria and fungi. To run the app you need to install R and R Studio. Data are available in R (.rds) format. The FoodMicrobionet database and related scripts are available on GitHub (https://github.com/ep142/FoodMicrobionet) This compressed folder contains folder shiny_FMBN_3_1: contains the app folder, the runShinyFMBN_3.R script (a R script to install all needed packages and run the app) and the app manual in .html format
Files
Steps to reproduce
Read carefully the instructions provided in the manuals and the scripts.
Institutions
Universita degli Studi della Basilicata
Categories
High-Throughput Sequencing, Microbial Ecology of Foods, Microbial Community Structure, Food Microbiology, Biological Database, Microbial Ecology