ShinyFMBN, a Shiny app to access FoodMicrobionet

Published: 22 April 2024| Version 9 | DOI: 10.17632/8fwwjpm79y.9
Eugenio Parente


This data set contains the ShinyFMBN app and the FoodMicrobionet database v5 The ShinyFMBN app allows you to access FoodMicrobionet 5, a repository of data on food microbiome studies including data for both bacteria and fungi. To run the app you need to install R and R Studio. Data are available in R (.rds) format. The FoodMicrobionet database and related scripts are available on GitHub ( This compressed folder contains folder shiny_FMBN_2_5: contains the app folder, the runShinyFMBN_2_5.R script (a R script to install all needed packages and run the app) and the app manual in .html format


Steps to reproduce

Read carefully the instructions provided in the manuals and the scripts.


Universita degli Studi della Basilicata Scuola di Scienze Agrarie Forestali Alimentari ed Ambientali


High-Throughput Sequencing, Microbial Ecology of Foods, Microbial Community Structure, Food Microbiology, Biological Database, Microbial Ecology