Driver-ASE testing dataset

Published: 22 June 2021| Version 4 | DOI: 10.17632/8x3y5swppw.4
Contributor:
zhongshan cheng

Description

(1) This 'Database.zip' is required by Driver-ASE, which is a software to search for potential driver mutations located in different regulatory regions by associating mutations with gene-level ASE. Due to the large size of the 'Database.zip' (>26GB), it is freely available at the following shared link via https://mega.nz: https://mega.nz/file/p1R0iZjB#SBHjUncZf4qomuBkfw2r8GnquDK1wgE0DAw20IEsRcc (2) The 'Pipeline2MapMuts2DiffRegulatoryRegions.zip' contains perl scripts for mapping mutations to different regulatory regions and prepare mutation annotation data for associating mutations with gene-level ASE, which is detailed in the github of Driver-ASE (https://github.com/MichealRollins-Green/Driver-ASE). Note: please run the shell script 'Run_Pipeline.sh' under the directory contain it in Linux system! The final results would be in the directory 'final_outputdir'.

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