BM trephine - raw DSP count data

Published: 17 February 2020| Version 1 | DOI: 10.17632/92835h4bz7.1
Rachel Koldej


Determining the applicability of NanoString GeoMX to the analysis of BM trephine samples. 5 samples were analysed. MDS1, Normal, MDS2, AA1 and AA2. 12 x 300um ROIs were selected in each sample and analysed using GeoMX digital spatial profiling. For MDS1, Normal and MDS2 - ROIs 1-10 are in tissue, ROI 11 in decalcified trabeculum and ROI 12 in blank slide. For AA1 and AA2 - ROIs 1-11 are in tissue and ROI 12 is in blank slide. Raw counts and technical controls (pos and neg ERCC) are shown.



Immunohistochemistry, Bone Marrow Microenvironment