Dataset for shotgun assembly used on the manuscript: “Degradation of recalcitrant polyurethane and xenobiotic additives by a selected landfill microbial community and its biodegradative potential revealed by proximity ligation-based metagenomic analysis”

Published: 14 Nov 2019 | Version 1 | DOI: 10.17632/bkwf2xhytj.1
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Description of this data

This dataset contains the microbial shotgun “de novo” assembly and the log file for the assembly run done with metaSPAdes software, from the selected landfill microbial community BP8. This analysis was performed with 17 282 414 raw reads obtained by paired-end sequencing using NextSeq 500 Illumina platform.
The archive contigs.fasta contains the raw assembly output with no parsing.
More data can be found in Preprint by Gaytán et al., (2019), web address: https://www.biorxiv.org/content/10.1101/760637v2.full

Experiment data files

Steps to reproduce

The information is hosted in the file spades.log

Related links

Latest version

  • Version 1

    2019-11-14

    Published: 2019-11-14

    DOI: 10.17632/bkwf2xhytj.1

    Cite this dataset

    Gaytán, Itzel; Sánchez-Reyes, Ayixon; Burelo, Manuel ; Vargas-Suárez, Martín ; Liachko, Ivan; Press, Maximilian ; Sullivan, Shawn ; Cruz-Gómez, M. Javier ; Loza-Tavera, Herminia (2019), “Dataset for shotgun assembly used on the manuscript: “Degradation of recalcitrant polyurethane and xenobiotic additives by a selected landfill microbial community and its biodegradative potential revealed by proximity ligation-based metagenomic analysis””, Mendeley Data, v1 http://dx.doi.org/10.17632/bkwf2xhytj.1

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Categories

Bioinformatics, Biodegradation, Metagenomics, Polyurethane, Environmental Pollution

Licence

CC BY 4.0 Learn more

The files associated with this dataset are licensed under a Creative Commons Attribution 4.0 International licence.

What does this mean?
You can share, copy and modify this dataset so long as you give appropriate credit, provide a link to the CC BY license, and indicate if changes were made, but you may not do so in a way that suggests the rights holder has endorsed you or your use of the dataset. Note that further permission may be required for any content within the dataset that is identified as belonging to a third party.

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