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Version 1

Multiplexed Images of Melanoma Lymph Node Metastases

Published:13 June 2023|Version 1|DOI:10.17632/zcz8743fcv.1
Contributors:Eli Pikarsky, Michal Lotem, Tal Keidar Haran, Idan Milo, Yael Amitay, Leeat Keren

Description

MIBI data containing 0.8x0.8mm2 multiplexed images from lymph nodes of multiple patients with melanoma metastases. The data includes the clean images of multiple proteins, cell segmentation and cell classification. The data is saved in CellSighter input format and was used to train and evaluate CellSighter on the task of cell classification. Further information can be found in our paper "CellSighter: A neural network to classify cells in highly multiplexed images".

Institutions

Weizmann Institute of Science

Categories

Multiplexing, Cellular Imaging

Licence

Creative Commons Attribution 4.0 International

Version 2

Multiplexed Images of Melanoma Lymph Node Metastases

Published:8 July 2023|Version 2|DOI:10.17632/zcz8743fcv.2
Contributors:Eli Pikarsky, Michal Lotem, Tal Keidar Haran, Idan Milo, Yael Amitay, Leeat Keren

Description

MIBI data containing 0.8x0.8mm2 multiplexed images from lymph nodes of multiple patients with melanoma metastases. The data includes the clean images of multiple proteins, cell segmentation and cell classification. The data is saved in CellSighter input format and was used to train and evaluate CellSighter on the task of cell classification. Further information can be found in our paper "CellSighter: A neural network to classify cells in highly multiplexed images".

Institutions

Weizmann Institute of Science

Categories

Multiplexing, Cellular Imaging

Licence

Creative Commons Attribution 4.0 International