Foraging Behavior in health and disease

Description

This is data and code related to my paper: Ecological Suboptimality in Naturalistic Foraging: Amplified Deviation from Optimality in a Mouse Model of Alzheimer Disease

Steps to reproduce

Because of the large volume of data, only two sample trials are included in this repository. Mouse behavior was recorded under two alley-length conditions, 50 cm and 100 cm, using both top and front camera views. The two Excel files associated with the videos contain the DeepLabCut output used to identify the mouse’s position during each trial. These position data, together with additional measures extracted from the videos, were used to construct the main data table. The file DataTable.csv contains the complete data table for all trials. The .ipynb files read this table, perform the analyses, and generate the results reported in the paper.

Institutions

• University of Lethbridge

  Alberta, Lethbridge

Categories

Funders

• Alzheimer's Association

  Chicago

  Grant ID: 23-1152151
• Canadian Institutes of Health Research

  Ottawa

  Grant ID: 507080
• Natural Sciences and Engineering Research Council of Canada

  Ottawa

  Grant ID: RGPIN-2021-04149

Licence