Repurposing of a DNA segregation machinery into a cytoskeletal system controlling cell shape
Description
SOURCE DATA: Data from the manuscript of Springstein et al., "Repurposing of a DNA segregation machinery into a cytoskeletal system controlling cell shape”. - Alignments/ - Cyanobacteria_species.aln Concatenation of the multiple sequence alignments of the RNA polymerase β and β′ subunit protein sequences from all Cyanobacteria species in the dataset, used to reconstruct a species phylogeny of the Cyanobacteria phylum. - ParM_Bacteria.aln Multiple sequence alignment of representative ParM proteins identified across all bacterial phyla. - ParM_ParR_Cyanobacteria.aln Concatenation of the multiple sequence alignments of ParM and ParR protein sequences identified in Cyanobacteria. - Phylogenies/ - Cyanobacteria_species.treefile Species phylogeny of Cyanobacteria (in Newick format). - Cyanobacteria_species.pdf Species phylogeny of Cyanobacteria (in pdf format with annotations). - ParM_Bacteria.treefile Phylogeny of ParM proteins identified across all bacterial phyla (in Newick format). - ParM_Bacteria.pdf Phylogeny of ParM proteins identified across all bacterial phyla (in pdf format with annotations). - ParM_ParR_Cyanobacteria.treefiles Phylogeny of the concatenation of ParM and ParR proteins identified in Cyanobacteria (in Newick format). - ParM_ParR_Cyanobacteria.pdf Phylogeny of the concatenation of ParM and ParR proteins identified in Cyanobacteria (in pdf format with annotations). - Profiles/ - RNApolB.hmm HMM profile used for the identification of RNA polymerase β proteins in the Cyanobacteria genomes. - RNApolBp.hmm HMM profile used for the identification of RNA polymerase β′ proteins in the Cyanobacteria genomes. - ParM.hmm HMM profile used for the identification of ParM proteins in bacterial genomes. - ParR.hmm HMM profile used for the identification of ParR proteins in bacterial genomes.