Leishmania infantum (JPCM5) proteome
Description
The current version of the Leishmania infantum (JPCM5 strain) genome was published in 2017 (González-de la Fuente et al., PMID: 29273719). Since then, it has been incorporated into different databases: NCBI, ENA, UniProt, TriTrypDB, among others. Although the genome sequence remains the same, gene annotations have been improved by incorporating information derived from transcriptomics and proteomics studies and bibliographic sources in which particular genes/proteins were analyzed. The process following in updating the annotations has been described in the article by Camacho et al (2023. Leishmania infantum (JPCM5) Transcriptome, Gene Models and Resources for an Active Curation of Gene Annotations. Genes (Basel). 14, 866; PMID: 37107624). The archive linked to this Mendeley data entry is a Fasta file with the sequences of all proteins annotated to date in L. infantum, accounting for a total of 8517 proteins. For many of these entries, individual entries have been created in the Mendeley data repository and are searchable by protein ID or protein name. This information, for instance, may be helpful for protein identification by searching mass spectra derived from proteomics studies against this database.
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Steps to reproduce
It is a Fasta file
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Funding
Agencia Estatal de Investigación
PID2020-117916RB-I00