SLDMOL: A tool for the structural characterization of thermally disordered membrane proteins

Published: 14 Mar 2019 | Version 1 | DOI: 10.17632/fdzgkn2kpk.1

Description of this data

This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)

Abstract
SLDMOL is a program for modeling the 1-D scattering length density (SLD) profile of proteins at the lipid membrane–solution interface or adsorbed to other surfaces. The program reads experimental SLD data from neutron or X -ray reflectivity measurements and compares the results to a trajectory of protein structures, finding the conformation and orientation that best fits the experimental data. SLDMOL is a freely distributed open source program written in python that can be run independently u...

Title of program: SLDMOL
Catalogue Id: AETX_v1_0

Nature of problem
Reflectivity is a powerful technique to study the conformation of biological molecules at surface and interfaces. Open source software that facilitates computational modeling and interpretation of experimental results in terms of detailed molecular structure is currently lacking.

Versions of this program held in the CPC repository in Mendeley Data
AETX_v1_0; SLDMOL; 10.1016/j.cpc.2014.07.006

Experiment data files

This data is associated with the following publication:

SLDMOL: A tool for the structural characterization of thermally disordered membrane proteins

Published in: Computer Physics Communications

Latest version

  • Version 1

    2019-03-14

    Published: 2019-03-14

    DOI: 10.17632/fdzgkn2kpk.1

    Cite this dataset

    Curtis, Joseph E.; Zhang, Hailiang; Nanda, Hirsh (2019), “SLDMOL: A tool for the structural characterization of thermally disordered membrane proteins ”, Mendeley Data, v1 http://dx.doi.org/10.17632/fdzgkn2kpk.1

Statistics

Views: 499
Downloads: 36

Categories

Molecular Biology, Biological Sciences, Computational Physics

Licence

GPLv3 Learn more

The files associated with this dataset are licensed under a GNU Public License Version 3 licence.

What does this mean?

The GNU General Public License is a free, copyleft license for software and other kinds of works.

Report