Genome assembly and annotation of Cucumis melo L. var. chate
Published: 24 March 2026| Version 2 | DOI: 10.17632/gk3h2b8g2p.2
Contributors:
Marzia Guerriero, Stefano Pavan, Matteo Schiavinato, Marco Di MarsicoDescription
This repository hosts the genome assembly of Cucumis melo L. var. chate, reconstructed via a hybrid assembly of PacBio HiFi, ONT ultra-long, and Hi-C sequencing technologies. Data includes: - FASTA files: Primary and masked genome assemblies. - Comparative Tools: A conversion table linking this assembly to the existing reference. - Annotation Files: Gene models, transcriptomes, protein sequences, and transposable element (TE) characterizations. - Functional Annotation: A comprehensive table mapping Gene IDs to Gene Names, Gene Ontology (GO) terms, and detailed Functional Descriptions, facilitating downstream biological interpretation.
Files
Categories
Genomics, Bioinformatics, Agriculture