Germline SNPs and indels in patients with atherosclerosis
Published: 1 December 2021| Version 1 | DOI: 10.17632/hj68dfm5sm.1
Contributors:
, Description
The dataset contains germline SNPs and indels of white blood cells and carotid atherosclerotic plaque of the same patients. The data was gathered by whole-exome sequencing technology. The variants were calling by GATK4 Best practice workflow “Germline short variant discovery (SNPs + Indels).”
Files
Steps to reproduce
The exon regions were sequenced by HiSeq 1500 (Illumina) with 2х150 paired-end format. The SureSelect Clinical Research Exome V2 exome enrichment kit (Design ID #S06588914) was used.
Institutions
Tomskij nacional'nyj issledovatel'skij medicinskij centr Rossijskoj akademii nauk
Categories
Clinical Genetics, Atherosclerosis, Single Nucleotide Polymorphism, Exome Sequencing