New protein families with hendecad coiled coils in the proteome of life

Published: 29 June 2023| Version 1 | DOI: 10.17632/mbth74w7wy.1
Contributor:
Mikel Martinez Goikoetxea

Description

This repository contains the cluster map (which includes sequences and groups) and structural models used for our paper, in which we describe a number of new hendecad coiled-coil families in the proteome of life. The cluster map provides a visualization of the sequence relationships of these sequences and can be opened with CLANS (https://www.eb.tuebingen.mpg.de/protein-evolution/software/clans). The structure models were predicted with AlphaFold and can be opened with a PDB viewer, such as PyMol. We also include a FASTA file with all the sequences from the cluster map.

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Categories

Bioinformatics, Coiled-Coil Helix, Computational Biology

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