Example dataset of mouse spinal cord sections for processing, reconstruction and atlas registration using SpinalJ (Fiederling et al., 2021; https://www.biorxiv.org/content/10.1101/2021.05.06.443008v1). Files include pre-processed single section images, some intermediate pre-processing files, as well as all files generated during section registration, atlas mapping and analysis. All files were created from raw image data provided in SpinalJ_example_data_raw(1-6).
Steps to reproduce
Data was generated using SpinalJ v1.13 (https://github.com/felixfiederling/SpinalJ) based on raw images provided in datasets SpinalJ_example_data_raw(1-6).