A study of MapToCleave: high-throughput profiling of microRNA biogenesis in living cells. Kang et al. : MapToCleave unprocessed miRNA precursors
Description
MapToCleave_unprocessed_miRNA_precursor_IDs.txt, Related to Figure 2B. The file contains the identity information of MapToCleave unprocessed miRNA precursors tested in human HEK-293T cells. The human (hsa), mouse (mmu), drosophila (dme) and nematode (cel) miRNA precursors are bona fide miRNA curated in MirGeneDB, while planarian (sme) and sea anemone (nve) miRNA precursors are curated in miRBase. It should be noted that 16 unprocessed miRNA precursors annotated as mirtron were removed from the list. They will not affect the analysis. The removed mirtron miRNA precursors are: cel-mir-62:MI0000033:in:mirtron,dme-mir-1003:MI0005864:in:mirtron,dme-mir-1004:MI0005865:in:mirtron,dme-mir-1005:MI0005866:in:mirtron,dme-mir-1006:MI0005867:in:mirtron,dme-mir-1007:MI0005868:in:mirtron,dme-mir-1008:MI0005869:in:mirtron,dme-mir-1009:MI0005870:in:mirtron,dme-mir-1010:MI0005871:in:mirtron,dme-mir-1012:MI0005873:in:mirtron,dme-mir-1013:MI0005874:in:mirtron,dme-mir-1014:MI0005875:in:mirtron,hsa-mir-3940:MI0016597:in:3p-tailed,hsa-mir-5010:MI0017878:in:5p-tailed,mmu-mir-1981:MI0009992:in:mirtron and mmu-mir-3097:MI0014090:in:5p-tailed.