Functional enrichment analysis present in the ten Cancer-Hallmarks of Homo sapiens and Arabidopsis thalina

Published: 19 May 2021| Version 1 | DOI: 10.17632/myyy2wxd59.1
Contributor:
Chrystian Camilo Sosa Arango

Description

This dataset includes the most probable biological processes involved in a list consistent of 5494 genes representing ten cancer-hallmarks in Homo sapiens (SD1) and their respective 2223 orthologues in A. thaliana (SD2).

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Steps to reproduce

Agene ontology enrichment analysis via ShinyGO v0.61 was performed for both, H. sapiens and A. thaliana gene lists to categorize them in gene ontologies terms (GO), maintaining GO terms with FDR < 0.05 after applied a Fisher test, and limiting GO terms list until 500 GO terms enriched per cancer hallmark.

Institutions

Pontificia Universidad Javeriana - Cali

Categories

Biotechnology, Bioinformatics, Cancer Systems Biology

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