Homology model for human obscurin kinase domain 1 (OK1)

Published: 22 February 2021| Version 1 | DOI: 10.17632/pfmjz9s4pc.1
Contributor:
Stephan Lange

Description

To generate a homology model of obscurin kinase domain 1, comparative modelling was performed using RosettaCM through the Rosetta server. Five models were produced, either representing the closed or open states of the kinase. The model with the highest degree of similarity to the closed state was selected for further analysis. To aid visual orientation, ATP (mol2 file downloaded from Zinc15) was modelled into the active site using Autodock Vina. The top-scoring model of 3 docking attempts was uploaded to Mendeley.

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