Data for: Genomic regions associated with mycelial growth and host specificity in Ceratocystis pathogens

Published: 27 Jun 2019 | Version 1 | DOI: 10.17632/rkn3mbcdf9.1

Description of this data

This data provides the MinION genome sequence data for the two genomes used in linkage map and QTL analyses of Ceratocystis fimbriata and C. manginecans. The genomes consist of long sequence reads, obtained from MinION sequence data, to provide improved contig assemblies, and Illumina sequence data to improve base call quality.

The dataset also provides a python script that was used to convert the VCF file obtained from GATK to a binary code of A and B; the format required for JoinMap software for linkage map construction.

Experiment data files

This data is associated with the following publication:

QTL mapping of mycelial growth and aggressiveness to distinct hosts in Ceratocystis pathogens

Published in: Fungal Genetics and Biology

Latest version

  • Version 1


    Published: 2019-06-27

    DOI: 10.17632/rkn3mbcdf9.1

    Cite this dataset

    Barnes, Irene; Wingfield, Brenda; van der Nest, Magrieta; Wingfield, Michael; Fourie, Arista; de Vos, Lieschen (2019), “Data for: Genomic regions associated with mycelial growth and host specificity in Ceratocystis pathogens”, Mendeley Data, v1


Views: 101
Downloads: 17


Genomics, Genetic Marker, Fungal Pathogenesis


CC BY 4.0 Learn more

The files associated with this dataset are licensed under a Creative Commons Attribution 4.0 International licence.

What does this mean?
You can share, copy and modify this dataset so long as you give appropriate credit, provide a link to the CC BY license, and indicate if changes were made, but you may not do so in a way that suggests the rights holder has endorsed you or your use of the dataset. Note that further permission may be required for any content within the dataset that is identified as belonging to a third party.