TP53
Description
Data repository for the referenced manuscript. All generated and optimized networks for TCGA and CCLE can be found in the corresponding folders. The input files have been included as a Shiny App .zip file, which combined with the cited GitHub repository below, provide a full Shiny App with GUI to reproduce the results. Results concerning the ML and community detection signatures plus survival data used are provided also in the corresponding folders.
Files
Steps to reproduce
From the GitHub repository cited below, download the .zip of all functions and unzip inside the Shiny.app in /software_inputs, in its parent directory (where the inputs folder will be). Use the provided packages in R and run the shiny app using the "app.R" function. This will load the GUI with all the necessary options to reproduce the results here.
Institutions
Categories
Funding
European Research Council
MICROC:772970