Dataset of antigenic distance measures, hemagglutination inhibition, viral lung titers, and weight loss in mice and ferrets when exposed to HA-based vaccination or sub-lethal A(H1) influenza infection

Published: 11 February 2021| Version 1 | DOI: 10.17632/rssdph9527.1
Amanda Skarlupka


This is a dataset containing the amino acid sequence substitution based antigenic measures for different A(H1) influenza virus pairs. For each virus pair the hemagglutination inhibition (HAI) titers after vaccination/initial exposure are included. After challenge, the viral lung titer and percent weight loss in mice are also included.


Steps to reproduce

Load the raw data. Run the processing code. Run the exploratory code. Code was written to be implemented in R.


University of Georgia


Immunology, Influenza, Mouse Model