Properties of the Chromatin Fiber Sampled from Molecular Biosystems Simulations

Published: 24 March 2020| Version 2 | DOI: 10.17632/t4dvkhy4vy.2
Dmitri Kireev


This data set contains properties of the chromatin fiber sampled from molecular biosystems simulations and is created to support a manuscript "Submolecular-resolution 3D Simulations of the Oct4 Promoter Region Predict Structural Mechanism of Heterochromatin Formation". The included properties are radius of gyration (Rg_Mean), number of HP1-mediated inter-nucleosome bridges (nBridges_Mean), average size of HP1-mediated loops (mBRIDGE_loop_Mean). Each value is a mean over 100 simulation snapshots.