WGS data of Bifidobacterium bifidum ICIS-504

Published: 31 March 2022| Version 2 | DOI: 10.17632/vtxknw7n3y.2
Sergey Andryuschenko


This whole-genome shotgun project has been deposited at GenBank under the accession number JAJJPE000000000.1. The BioProject database ID of the sequenced strain is PRJNA776132. The sequence read archive of this project is available under the ID SRP346303.


Steps to reproduce

The genomic DNA extraction was performed using the standard phenol-chloroform method; fragment library was prepared by using Illumina, San Diego, CA Kit. The library was sequenced in a 2 × 300-nucleotide run using the MiSeq reagent kit version 3 and MiSeq desktop sequencer (Illumina). The reads were quality trimmed using the sliding window mode of the Trimmomatic program. De novo assembly of draft genome sequences was performed using SPAdes version 3.10.1 (St. Petersburg genome assembler).


Bacterial Genetics, Genome Sequencing