SUPPLEMENTAL DATA: Genomic phylogeography of the White-crowned Manakin Pseudopipra pipra (Aves: Pipridae) illuminates a continental-scale radiation out of the Andes

Published: 29-04-2021| Version 1 | DOI: 10.17632/w2tykkj77w.1
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SUPPLEMENTAL DATA FOR Genomic phylogeography of the White-crowned Manakin Pseudopipra pipra (Aves: Pipridae) illuminates a continental-scale radiation out of the Andes Author Affiliations: Jacob S. Berv (1,2,3), Leonardo Campagna (1,2), Teresa J. Feo (4), Ivandy Castro-Astor (5), Camila C. Ribas (6), Richard O. Prum (7), Irby J. Lovette (1,2) 1. Fuller Evolutionary Biology Program, Cornell Lab of Ornithology, 159 Sapsucker Woods Road, Ithaca, NY 14850, USA. 2. Department of Ecology and Evolutionary Biology, Cornell University, 215 Tower Road, Ithaca, NY 14853, USA. 3. Department of Ecology and Evolutionary Biology, and University of Michigan Museum of Paleontology, 1105 North University Avenue, Biological Sciences Building, Ann Arbor, MI 48109-1085, USA. 4. Department of Vertebrate Zoology, MRC-116, National Museum of Natural History, Smithsonian Institution, Washington, DC 20013, USA. 5. Department of Biology, City College of New York and CUNY Graduate Center, City University of New York, New York, NY 10031, USA 6. Coordenacão de Biodiversidade, Instituto Nacional de Pesquisas da Amazônia, Manaus, AM, Brazil 7. Department of Ecology and Evolutionary Biology, and Peabody Museum of Natural History, Yale University, New Haven, Connecticut, 06520, USA. Correspondence to Jacob S. Berv (jsb439@cornell.edu) LAST UPDATED 28 APRIL 2021 CODE WILL ALSO BE MADE AVAILABLE AT https://github.com/jakeberv The parent directory contains many data files related to the analyses presented in this manuscript. The top level file 'Pseudopipra_code.R' contains function definitions and code used for most of the analyses in this article. This code is annotated with descriptions throughout. Note that all files referenced within various subdirectories must be unzipped for the R code to work. Download "Supplemental Data.zip" to download the entire archive, or browse individual files for download. SEE README.TXT for additional information

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