Datasets exploring putative lncRNA-miRNA-mRNA axes in breast cancer cell lines

Published: 10 June 2021| Version 1 | DOI: 10.17632/wstfmr4z57.1
Contributors:
Marie-Claire Wasson,
,
,
,

Description

Data accompanied with the paper "Datasets exploring putative lncRNA-miRNA-mRNA axes in breast cancer cell lines" by Wasson et al. in Data in Brief. Please refer to this article for full project details. The data consists of : * .txt files containing predicted lncRNA/miRNA/mRNA axis for four long non-coding RNAs (LincIN, SPRY4-IT1, AC009283.1, LincK) * .R script we used to generate predicted lncRNA/miRNA/mRNA microarray data obtained from GEO datasets (GSE79214, GSE62507, GSE134254, GSE109007)

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Steps to reproduce

Full methods to reproduce these datasets are detailed in our Data in Brief article: Wasson MD, Brown JM, Venkatesh J, Fernando W, Marcato P. Datasets exploring putative lncRNA-miRNA-mRNA axes in breast cancer cell lines. DIB. 2021

Institutions

Dalhousie University

Categories

Breast Cancer, Messenger RNA, MicroRNA, Long Noncoding RNA

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