Synthetic 2D Gel Electrophoresis protein spot images

Published: 27 April 2022| Version 1 | DOI: 10.17632/x62kt53nnr.1
Contributor:
Dalius Matuzevicius

Description

Dataset (test set) of synthetic 2D Gel Electrophoresis protein spot images. The intended use of the dataset is the development of protein spot models. Dataset contains: im_Input_v1_1 – Input image, without secondary spots, with intensity scaling and added constant background im_Input_v1_2 – Input image, without secondary spots, with intensity scaling and added constant background, and added Gaussian noise im_Input_v1_3 – Input image, without secondary spots, with intensity scaling and added constant background, and added varying background distortions, but without Gaussian noise im_Input_v2_1 – Input image, with secondary spots, with intensity scaling and added constant background im_Input_v2_2 – Input image, with secondary spots, with intensity scaling and added constant background, and added Gaussian noise im_Input_v2_3 – Input image, with secondary spots, with intensity scaling and added constant background, and added varying background distortions, but without Gaussian noise im_Target_1 – Ground truth image (with intensity scaling and without background) im_Target_2 – Ground truth image (with intensity scaling and with constant background) im_Mask_1 – mask for the im_Input_v1_x input images (input images are without secondary spots so the mask covers entire image patch) im_Mask_2 – mask for the im_Input_v2_x input images (mask shows region of the primary spot)

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Institutions

Vilniaus Gedimino Technikos Universitetas

Categories

Proteomics, Two-Dimensional Electrophoresis, Protein-Related Bioinformatics, Image Analysis

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