Post-transplantation clonal dynamics of hematopoietic stem cells carrying prenatal and early-life DNMT3A mutations - Derks & Mueskens et al 2025

Published: 11 November 2025| Version 1 | DOI: 10.17632/ysvds7rgbw.1
Contributor:
Bioinformatics van Boxtel

Description

This Mendeley Dataset contains pre-processed data and code required to re-create the figures in 'Post-transplantation clonal dynamics of hematopoietic stem cells carrying prenatal and early-life DNMT3A mutations.' (Derks & Müskens et al., 2025, Hemasphere) All preprocessed (somatic mutation) data types are available in two versions, corresponding to the set of HSPCs used for germline filtering. 'refpair 1': germline reference set 1 is used (Germline A,Fig. 1B) 'refpair 2'': germline reference set 2 is used (Germline B,Fig. 1B) The code at time of publication is available in folder 'Code', with additional README files detailing the use of the code. The code is also available on Github: https://github.com/ProjectsVanBox/LTHIT_scWGS

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Institutions

  • Prinses Maxima Centrum voor Kinderoncologie

Categories

Phylogenetic Tree, Patient with Hematopoietic Stem Cell Transplantation, Next Generation Sequencing, Genome Sequencing

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