Veterinary Microbiology

Data for this manuscript.

Raw microarray data obtained from the Kits E.coli PanType AS2 and ShigaType AS-1

Two sequence pairs (Forward and Reverse sequencing) from RPO and ITS genes for instance were uploaded.

Adenoviruses are a relatively common infection of reptiles globally and are most often reported in captive central bearded dragons (Pogona vitticeps). We report the first evidence of adenoviruses in bearded dragons in their native habitat in Australia. Oral-cloacal swabs and blood samples were collected from 48 free-ranging bearded dragons from four study populations: western bearded dragons (P. minor minor) from Western Australia (n = 4), central bearded dragons (P. vitticeps) from central Australia (n = 2) and western New South Wales (NSW) (n = 29), and coastal bearded dragons (P. barbata) from south-east Queensland (n = 13). Samples were tested for the presence of adenoviruses using a broadly reactive (pan-adenovirus) PCR and a PCR specific for agamid adenovirus-1. Agamid adenovirus-1 was detected in swabs from eight of the dragons from western NSW and one of the coastal bearded dragons. Lizard atadenovirus A was detected in one of the dragons from western NSW. Adenoviruses were not detected in any blood sample. All bearded dragons, except one, were apparently healthy and so finding these adenoviruses in these animals is consistent with bearded dragons being natural hosts for these viruses.

all of datas

This cross-sectional study investigates the abundance of cefotaxime-resistant Escherichia coli (CREC) in the faeces and tonsils of 96 pigs during slaughter. Moreover, different isolates from a selected number of pigs were tested to study the diversity of blaESBL genes within E. coli isolates from one pig. Cefotaxime-resistant bacteria (CRB; based on enumeration results on MacConkey agar supplemented with 1 mg/L cefotaxime) were found in the faeces of 77 pigs (80%; 95% CI: 70 to 87%) and the tonsils of 91 pigs (95%; 95% CI: 88% to 98%). Cefotaxime-resistant E. coli (CREC; based on enumeration results on Tryptone Bile X-glucuronide agar supplemented with 1 mg/L cefotaxime) were detected in 72 faecal samples (75%; 95% CI: 64 to 83%) and 45 tonsil samples (47%; 95% CI: 35 to 59%), in numbers up to 5.5 and 5.6 log10 CFU/g, respectively. Within one sample, CREC isolates with up to five different combinations of ESBL genes were observed. In three out of 16 faecal samples and six out of 14 tonsil samples, only one ESBL gene profile was found.

This dataset includes the RT-PCR results, RT-LAMP results, and the minutes to positive ROC curve calculations. This dataset includes data for the synthetic gBlock, cell culture, and clinical sample assays (nasal swabs and nasal wipes). Also included is a list of FDA approved point of care tests for influenza A virus to date (2-16-2024). MIQE guidelines are also included.