Python Jupyter Notebook to Perform Automatic Microscopic Image Analysis by Moving Window Local Fourier Transform and Machine Learning

Published: 13 November 2019| Version 2 | DOI: 10.17632/25x46xjyr5.2
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Description

Python Jupyter Notebook together with exemplary images to perform automatic microscopic image analysis using moving window local Fourier Transform and Machine Learning data decomposition using Non-Negative Matrix Factorization (NMF). The number of decomposition components is obtained from prior PCA Scree Plot analysis.

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Institutions

Uniwersytet Jagiellonski w Krakowie Wydzial Fizyki Astronomii i Informatyki Stosowanej, Uniwersytet Jagiellonski w Krakowie Instytut Fizyki im Mariana Smoluchowskiego

Categories

Microscopy, Machine Learning, Principal Component Analysis, Electron Microscopy, Image Analysis (Medical Imaging), Scanning Electron Microscopy, Scanning Transmission Electron Microscopy

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