Data for manuscript: Effects of functional phylogeny of light-response-related orthologous genes on seedling survival in a subtropical forest
Description
################################################################################ ################################################################################ This package contains data from: ################################################################################ Hui Shang, Yunquan Wang, Baocai Han, Xiangcheng Mi, Lei Chen, Yu Liang, Keping Ma Effects of functional phylogeny of light-response-related orthologous genes on seedling survival in a subtropical forest ################################################################################ The package contains four data files (in csv format) that were used in the analyses of the above mentioned publication. The structures of the data files are listed below with detailed descriptions of their contents. ################################################################################ Structure and description of data files that were used in the main analyses ################################################################################ 1. 01_seeding_neighborhood_variables_light_OTH0393.csv: 'data.frame': 20224 obs. of 16 variables 02_seeding_neighborhood_variables_light_OTH1734.csv: 'data.frame': 20224 obs. of 16 variables 03_seeding_neighborhood_variables_light_OTH3979.csv: 'data.frame': 20224 obs. of 16 variables 04_seeding_neighborhood_variables_light_OTH5329csv: 'data.frame': 20224 obs. of 16 variables YEAR: the year recorded the focal seedling. TRAP: the trap where the focal seedling located in. PLOT:the plot where the focal seedling located in. PLOTID: the plot ID named after the trap. TAG: the tag labeled the focal seedling IDSEEDL: the ID of the focal seedling named after the trap, the plot and the tag. fSPCODE: species code of the focal seedling. SPNAME: Chinese name of the focal seedling. HT: height of the focal seedling. SUR1y: alive(1) or dead (0) of the focal seedling after one year. seedl.constd:the standardizednumber of con-specific seedlings. BA.constd: the standardized basal area of conspecific adults. sAPDstd:the standardized average phylogenetic distance for neighbor seedlings. sNTPDstd:the standardized nearest taxon phylogenetic distance for neighbor seedlings. aAPDstd:the standardized average phylogenetic distance for neighbor adults. aNTPDstd:the standardized nearest taxon phylogenetic distance for neighbor adults.