Detection of Asian genetic components in autochthonous human Echinococcus multilocularis infections from endemic Warmia-Masuria (north-eastern Poland)
Published: 9 August 2023| Version 1 | DOI: 10.17632/45gp9scht8.1
Contributor:
Paweł GładyszDescription
Raw FSA files and normalised EmsB profiles of metacestodes extracted from patients of the University Centre for Maritime and Tropical Medicine in Gdynia treated for alveolar echinococcosis and living in Warmia-Masuria (north-eastern Poland). R script to calculate and visualise a UPGMA dendrogram with a genetic distance threshold. R script to perform Sammon’s nonlinear mapping with k-means clustering.
Files
Steps to reproduce
Profiles obtained following the instructions in Knapp J, Damy S, Brillaud J, et al. EWET: Data collection and interface for the genetic analysis of Echinococcus multilocularis based on EmsB microsatellite. PLoS One. 2017; 12(10): e0183849. Published 2017 Oct 3. doi:10.1371/journal.pone.0183849.
Institutions
Gdanski Uniwersytet Medyczny
Categories
Molecular Profiling
Funding
National Science Center
2020/37/B/NZ7/03934