Isolation of novel viruses infecting toxigenic and non-toxigenic bloom forming diatoms from the Northern Adriatic Sea

Published: 10 November 2023| Version 1 | DOI: 10.17632/489c8tjjxv.1
Contributors:
Timotej Turk Dermastia,
,

Description

Here allignments, assembled contigs and MEGAN files related to the manuscript Isolation of novel viruses infecting toxigenic and non-toxigenic bloom forming diatoms from the Northern Adriatic Sea can be found.

Files

Steps to reproduce

Nucleic acids from diatom culture lysates were obtained with Qiagen QIAamp MinElute Virus Kit. For nucleic acids processing see the Methods section of the original publication. Sequences were obtained on the Illumina NovaSeq sequencer using 2x150bp shotgun sequencing. Reads were assembled in metaSPAdes 3.15.5. Allignments were produced with MAFFT and TrimAl.

Institutions

Nacionalni institut za biologijo

Categories

Metagenomics, High-Throughput Sequencing

Funding

Javna Agencija za Raziskovalno Dejavnost RS

P1-0237

Javna Agencija za Raziskovalno Dejavnost RS

01Z14396

Javna Agencija za Raziskovalno Dejavnost RS

P4-0407

Javna Agencija za Raziskovalno Dejavnost RS

P4-0165

LifeWatch ERIC

RI-SI-2

Licence