A method for analysing tissue motion and deformation during mammalian cardiogenesis. Raiola et al.2025b

Published: 3 October 2025| Version 1 | DOI: 10.17632/54gbvnsgnp.1
Contributors:
, Miguel Torres

Description

This repository contains the source and supplemental data associated with the paper: "A method for analysing tissue motion and deformation during mammalian cardiogenesis." The data is structured according to the figures presented in the paper: Source_Data.zip: Contains the data directly linked to the figures in the paper. Supplementary_Data.zip: Contains all additional data. Code_Data.zip: Contains the input data required to run the pipeline. The folders have the same names as the ones in the GitHub repository: https://github.com/MorRaiola/QuantitativeAnalisysOfHTMorphogenesis." The repository includes the following files and formats: File Types: .ply files: 3D mesh data representing heart tissue deformation. These can be opened using MeshLab (https://www.meshlab.net/#download) or ParaView (https://www.paraview.org/download/). .vtk files: Contain directional vectors of tissue deformation, intended for use with ParaView. .ims files: Represent in silico fate maps and can be opened with Imaris Viewer (https://imaris.oxinst.com/imaris-viewer).

Files

Institutions

  • Fundacion Centro Nacional de Investigaciones Cardiovasculares Carlos III

Categories

Image Analysis (Medical Imaging)

Funders

Licence