Rank ordered PDB matches for each EC and KEGG in our study as defined by containing most similar bound ligands to cognate.

Published: 29 January 2018| Version 2 | DOI: 10.17632/7c48npgyr8.2
Contributor:
Jon Tyzack

Description

All PDB files in the SIFTS download dated 2017/09/23 with an EC reference were linked to related KEGG reactions, and the similarity of bound ligands to either KEGG reactants or products was calculated using the PARITY method. Rank ordered lists of PDB matches were then generated in terms of similarity of bound ligands to cognate.

Files

Institutions

  • European Bioinformatics Institute

Categories

Similarity Measure

Licence