genetic data

Published: 12 February 2025| Version 1 | DOI: 10.17632/ct2m5rfwvm.1
Contributor:
guillaume mestrallet

Description

ScRNAseq (123, 184 = WT, 266, 240, 259 = MSH2KO, 292, 287, 286 = WTantiPD1, 316, 257, 258 = MSH2 KOantiPD1), TCRseq and spatial RNAseq (n3 = WT, n7 = MSH2KO, n35 = WTantiPD1, n46 = MSH2 KOantiPD1) data of MMRd and WT CT26 tumors.

Files

Steps to reproduce

Code is available on Github and GoogleColab. https://github.com/gmestrallet/BasicScRNAseq https://github.com/gmestrallet/BasicSpatialRNAseq https://github.com/gmestrallet/IntegratingSpatialAndScRNAseq https://github.com/gmestrallet/TCRscRNAseqAnalysis

Institutions

Icahn School of Medicine at Mount Sinai Tisch Cancer Institute

Categories

Immunology, Oncology

Licence