Relative infectivity of the SARS-CoV-2 Omicron variant in human alveolar cells
Published: 14 November 2022| Version 1 | DOI: 10.17632/j26ht6sy3p.1
Contributors:
taewoo kim, Kyoung Il Min, Jeong-Sun Yang, Jun Won Kim, Junhyung Cho, Yun Ho Kim, Jeong Yeon Kim, Jeong Seok Lee, Young Tae Kim, kyungchang kim, Kwon Joong Na, Joo-Yeon Lee, Young Seok JuDescription
Without single-cell bam files, all metadata used for study are uploaded. 1. Metadata for infected alveolar cells and empty wells. (final_cell_metadata.csv and final_emptywell_metadata.csv) 2. Live virus fraction over experimental batches from H to K. (live_virus_assay.xlsx) 3. SARS-CoV-2 expression profile by two difference single-cell RNA seq methods. (samtools_depth_final.csv) 4. Expression of alveolar type-2 cell marker genes and SARS-CoV-2 related genes. (20221004_fig_dat_per_10k.tsv) 5. Table S1. A full list of clonal genomic mutations of SARS-CoV-2 variants. Related to Figure 1
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Institutions
Korea Advanced Institute of Science and Technology
Categories
Genomics, Organoid, Severe Acute Respiratory Syndrome Coronavirus 2, Single-Cell RNA Sequencing