Code & Data for "Viral infection switches the balance between bacterial and eukaryotic recyclers of organic matter during coccolithophore blooms"
Description
Code & Data for "Viral infection switches the balance between bacterial and eukaryotic recyclers of organic matter during coccolithophore blooms" Data also available on Dryad: (https://doi.org/10.5061/dryad.q573n5tfr) Sequences are deposited on NCBI: Bioproject PRJNA694552: 16S data is available under Biosample SAMN17576248 and 18S data is available under Biosample SAMN20295136 Flow cam data is deposited on Ecotaxa: "Flowcam Composite Aquacosm_2018_VIMS-Ehux"
Files
Steps to reproduce
Download all data, unzip into the main folder & execute the "Import data" section of the notebook first. Code for individual figures can be found in the individual sections. For best results, use Mathematica 12 (not 13). For a description of the experimental methods and details of the data analysis, see the paper.