Code & Data for "Viral infection switches the balance between bacterial and eukaryotic recyclers of organic matter during coccolithophore blooms"

Published: 7 November 2022| Version 1 | DOI: 10.17632/k33xvnxhdb.1
Contributors:
Matti Gralka, Flora Vincent

Description

Code & Data for "Viral infection switches the balance between bacterial and eukaryotic recyclers of organic matter during coccolithophore blooms" Data also available on Dryad: (https://doi.org/10.5061/dryad.q573n5tfr) Sequences are deposited on NCBI: Bioproject PRJNA694552: 16S data is available under Biosample SAMN17576248 and 18S data is available under Biosample SAMN20295136 Flow cam data is deposited on Ecotaxa: "Flowcam Composite Aquacosm_2018_VIMS-Ehux"

Files

Steps to reproduce

Download all data, unzip into the main folder & execute the "Import data" section of the notebook first. Code for individual figures can be found in the individual sections. For best results, use Mathematica 12 (not 13). For a description of the experimental methods and details of the data analysis, see the paper.

Categories

Microbiology, Marine Ecosystem

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