Transcriptome Analysis of Myrciaria dubia During Seeds Germination and Initial Growth of Seedlings
Published: 19 April 2020| Version 2 | DOI: 10.17632/ph76fvy3s5.2
Contributors:
Juan C. Castro,
J. Dylan Maddox,
Hicler Rodriguez,
Sixto Imán,
Marianela Cobos,
Jae D. Paredes,
Carlos G. Castro,
Janeth Braga,
Jorge L. Marapara,
PEDRO ADRIANZEN
Description
Contains the Transcriptome Shotgun Assembly Sequence Database of Myrciaria dubia during seeds germination and initial growth of seedlings. The database was obtained with six assembly softwares: IDBA-UD v1.1.3, MEGAHIT v1.2.9, rnaSPADES V3.9.0.1, SPAdes v3.13.0, Trinity v2.9.1 and Velvet v1.2.10. Also, in this dataset are included results obtained with BUSCO, TransDecoder, KAAS Annotation, and FunctionAnnotator Analysis.
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Institutions
Field Museum of Natural History, Instituto Nacional de Innovacion Agraria, Universidad Cientifica del Peru, Universidad Nacional de la Amazonia Peruana
Categories
Messenger RNA, Transcriptome, Seed Development, Tropical Fruit, Germination