Software_Guide_Compact

Published: 11 Oct 2018 | Version 1 | DOI: 10.17632/s24z62sbsf.1
Contributor(s):

Description of this data

Guide's software and data repository- compact version

Experiment data files

  • Software_Guide_Compact
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    • DATA
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      • Average-Embryo
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      • Brachyury-embryo-data
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      • Landmarks
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    • Division-Detection
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      • division_detection
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        • tests
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      • model_zoo
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        • pretrained
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      • scripts
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    • Images
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      • DataSetA
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        • Mmu_E1_mKate2.TM000000_timeFused_blending
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        • Mmu_E1_mKate2.TM000001_timeFused_blending
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        • Mmu_E1_mKate2.TM000002_timeFused_blending
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        • Mmu_E1_mKate2.TM000003_timeFused_blending
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        • Mmu_E1_mKate2.TM000004_timeFused_blending
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        • Mmu_E1_mKate2.TM000005_timeFused_blending
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        • Mmu_E1_mKate2.TM000006_timeFused_blending
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        • Mmu_E1_mKate2.TM000007_timeFused_blending
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        • Mmu_E1_mKate2.TM000008_timeFused_blending
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        • Mmu_E1_mKate2.TM000009_timeFused_blending
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        • Mmu_E1_mKate2.TM000010_timeFused_blending
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        • Mmu_E1_mKate2.TM000011_timeFused_blending
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        • Mmu_E1_mKate2.TM000012_timeFused_blending
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        • Mmu_E1_mKate2.TM000013_timeFused_blending
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        • Mmu_E1_mKate2.TM000014_timeFused_blending
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        • Mmu_E1_mKate2.TM000015_timeFused_blending
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        • Mmu_E1_mKate2.TM000016_timeFused_blending
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        • Mmu_E1_mKate2.TM000017_timeFused_blending
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        • Mmu_E1_mKate2.TM000018_timeFused_blending
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        • Mmu_E1_mKate2.TM000019_timeFused_blending
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        • Mmu_E1_mKate2.TM000020_timeFused_blending
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        • Mmu_E1_mKate2.TM000021_timeFused_blending
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        • Mmu_E1_mKate2.TM000022_timeFused_blending
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        • Mmu_E1_mKate2.TM000023_timeFused_blending
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        • Mmu_E1_mKate2.TM000024_timeFused_blending
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        • Mmu_E1_mKate2.TM000025_timeFused_blending
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        • Mmu_E1_mKate2.TM000026_timeFused_blending
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        • Mmu_E1_mKate2.TM000027_timeFused_blending
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        • Mmu_E1_mKate2.TM000028_timeFused_blending
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        • Mmu_E1_mKate2.TM000029_timeFused_blending
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        • Mmu_E1_mKate2.TM000030_timeFused_blending
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        • Mmu_E1_mKate2.TM000031_timeFused_blending
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        • Mmu_E1_mKate2.TM000032_timeFused_blending
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        • Mmu_E1_mKate2.TM000033_timeFused_blending
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        • Mmu_E1_mKate2.TM000034_timeFused_blending
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        • Mmu_E1_mKate2.TM000035_timeFused_blending
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        • Mmu_E1_mKate2.TM000036_timeFused_blending
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        • Mmu_E1_mKate2.TM000037_timeFused_blending
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        • Mmu_E1_mKate2.TM000038_timeFused_blending
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        • Mmu_E1_mKate2.TM000039_timeFused_blending
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        • Mmu_E1_mKate2.TM000040_timeFused_blending
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        • Mmu_E1_mKate2.TM000041_timeFused_blending
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        • Mmu_E1_mKate2.TM000042_timeFused_blending
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        • Mmu_E1_mKate2.TM000043_timeFused_blending
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        • Mmu_E1_mKate2.TM000044_timeFused_blending
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        • Mmu_E1_mKate2.TM000045_timeFused_blending
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        • Mmu_E1_mKate2.TM000046_timeFused_blending
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        • Mmu_E1_mKate2.TM000047_timeFused_blending
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        • Mmu_E1_mKate2.TM000048_timeFused_blending
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        • Mmu_E1_mKate2.TM000049_timeFused_blending
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        • Mmu_E1_mKate2.TM000050_timeFused_blending
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        • Mmu_E1_mKate2.TM000051_timeFused_blending
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        • Mmu_E1_mKate2.TM000052_timeFused_blending
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        • Mmu_E1_mKate2.TM000053_timeFused_blending
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        • Mmu_E1_mKate2.TM000054_timeFused_blending
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        • Mmu_E1_mKate2.TM000055_timeFused_blending
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        • Mmu_E1_mKate2.TM000056_timeFused_blending
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        • Mmu_E1_mKate2.TM000057_timeFused_blending
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        • Mmu_E1_mKate2.TM000058_timeFused_blending
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        • Mmu_E1_mKate2.TM000059_timeFused_blending
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        • Mmu_E1_mKate2.TM000060_timeFused_blending
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        • Mmu_E1_mKate2.TM000061_timeFused_blending
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        • Mmu_E1_mKate2.TM000062_timeFused_blending
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        • Mmu_E1_mKate2.TM000063_timeFused_blending
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        • Mmu_E1_mKate2.TM000064_timeFused_blending
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        • Mmu_E1_mKate2.TM000065_timeFused_blending
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        • Mmu_E1_mKate2.TM000066_timeFused_blending
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        • Mmu_E1_mKate2.TM000067_timeFused_blending
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        • Mmu_E1_mKate2.TM000068_timeFused_blending
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        • Mmu_E1_mKate2.TM000069_timeFused_blending
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        • Mmu_E1_mKate2.TM000070_timeFused_blending
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        • Mmu_E1_mKate2.TM000071_timeFused_blending
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        • Mmu_E1_mKate2.TM000072_timeFused_blending
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        • Mmu_E1_mKate2.TM000073_timeFused_blending
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        • Mmu_E1_mKate2.TM000074_timeFused_blending
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        • Mmu_E1_mKate2.TM000075_timeFused_blending
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        • Mmu_E1_mKate2.TM000076_timeFused_blending
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        • Mmu_E1_mKate2.TM000077_timeFused_blending
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        • Mmu_E1_mKate2.TM000078_timeFused_blending
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        • Mmu_E1_mKate2.TM000079_timeFused_blending
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        • Mmu_E1_mKate2.TM000080_timeFused_blending
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        • Mmu_E1_mKate2.TM000081_timeFused_blending
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        • Mmu_E1_mKate2.TM000082_timeFused_blending
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        • Mmu_E1_mKate2.TM000083_timeFused_blending
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        • Mmu_E1_mKate2.TM000084_timeFused_blending
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        • Mmu_E1_mKate2.TM000085_timeFused_blending
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        • Mmu_E1_mKate2.TM000086_timeFused_blending
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        • Mmu_E1_mKate2.TM000087_timeFused_blending
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        • Mmu_E1_mKate2.TM000088_timeFused_blending
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        • Mmu_E1_mKate2.TM000089_timeFused_blending
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        • Mmu_E1_mKate2.TM000090_timeFused_blending
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        • Mmu_E1_mKate2.TM000091_timeFused_blending
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        • Mmu_E1_mKate2.TM000092_timeFused_blending
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        • Mmu_E1_mKate2.TM000093_timeFused_blending
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        • Mmu_E1_mKate2.TM000094_timeFused_blending
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        • Mmu_E1_mKate2.TM000095_timeFused_blending
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        • Mmu_E1_mKate2.TM000096_timeFused_blending
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        • Mmu_E1_mKate2.TM000097_timeFused_blending
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        • Mmu_E1_mKate2.TM000098_timeFused_blending
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        • Mmu_E1_mKate2.TM000099_timeFused_blending
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        • Mmu_E1_mKate2.TM000100_timeFused_blending
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      • DataSetB
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        • klb
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    • Outputs
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      • Propagation.expected
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      • SVF2MaMuT
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    • Python-Scripts
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      • BlockMatching
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        • cmake
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        • external
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          • KLBFILE
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            • keller-lab-block-filetype
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              • cmake
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              • docs
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              • javaWrapper
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                • src
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                  • main
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                    • java
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                      • org
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                        • janelia
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                          • simview
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                            • klb
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                            • util
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                    • resources
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                      • native
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                        • x86_64-mac_os_x
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                  • test
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                    • java
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                      • org
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                        • janelia
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                          • simview
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                            • klb
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                    • resources
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              • juliaWrapper
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              • matlabWrapper
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                • klb_mexa64
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              • pythonWrapper
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              • src
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                • conda-recipe
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                • external
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                  • bzip2-1.0.6
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                  • zlib-1.2.8
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                    • amiga
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                    • as400
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                    • contrib
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                      • ada
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                      • amd64
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                      • asm686
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                      • blast
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                      • delphi
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                      • dotzlib
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                        • DotZLib
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                      • gcc_gvmat64
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                      • infback9
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                      • inflate86
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                      • iostream
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                      • iostream2
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                      • iostream3
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                      • masmx64
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                      • masmx86
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                      • minizip
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                      • pascal
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                      • puff
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                      • testzlib
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                      • untgz
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                      • vstudio
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                        • vc10
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                        • vc11
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                        • vc9
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                    • examples
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                    • msdos
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                    • nintendods
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                    • old
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                      • os2
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                    • qnx
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                    • test
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                    • watcom
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                    • win32
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                • jni
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              • test
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              • testData
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          • NIFTICLIB
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            • nifticlib-2.0.0
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              • cmake
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              • docs
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              • examples
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              • fsliolib
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              • nifticdf
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              • niftilib
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              • packaging
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              • real_easy
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              • Testing
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                • Data
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                • niftilib
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                  • cmake_testscripts
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                  • commands
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                • nifti_regress_test
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                  • cmake_testscripts
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                  • commands
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              • utils
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              • znzlib
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          • TIFF
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            • tiff-4.0.6
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              • build
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              • cmake
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              • config
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              • contrib
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                • addtiffo
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                  • .deps
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                  • .libs
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                • dbs
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                  • .deps
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                  • .libs
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                  • xtiff
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                • iptcutil
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                  • .deps
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                  • .libs
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                • mfs
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                • pds
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                • ras
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                • stream
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                • tags
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                • win_dib
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              • html
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                • images
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                • man
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              • libtiff
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                • .deps
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                • .libs
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              • m4
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              • man
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              • port
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                • .deps
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                • .libs
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              • test
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                • .deps
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                • images
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              • tools
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                • .deps
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                • .libs
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        • src
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          • blockmatching
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            • documentation
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              • figures
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              • use-examples
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                • data
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                • pointmatching
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                  • figures
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          • libbasic
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            • templates-generation
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              • templates-morpho-include
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              • templates-morpho-src
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              • templates-reech-include
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              • templates-reech-src
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          • libio
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      • I2AE
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        • config-csv
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      • IO
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        • IO
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      • SVF
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        • csv-parameter-files
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      • svf2MaMuT
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        • config-file
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      • TGMMlibraries
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        • TGMMlibraries
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          • TGMMlibraries
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      • Time-registration
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        • csv-parameter-files
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    • TGMM
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      • TGMM_Results
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        • GMEMtracking3D_2018_3_6_17_15_5
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          • XML_finalResult_lht
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      • Tracking_GMM_project-v0.3.0-win64
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        • bin
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Latest version

  • Version 1

    2018-10-11

    Published: 2018-10-11

    DOI: 10.17632/s24z62sbsf.1

    Cite this dataset

    Keller, Philipp (2018), “Software_Guide_Compact”, Mendeley Data, v1 http://dx.doi.org/10.17632/s24z62sbsf.1

Statistics

Views: 11736
Downloads: 10594

Categories

Microscopy, Organogenesis, Image Analysis

Licence

CC BY 4.0 Learn more

The files associated with this dataset are licensed under a Creative Commons Attribution 4.0 International licence.

What does this mean?
You can share, copy and modify this dataset so long as you give appropriate credit, provide a link to the CC BY license, and indicate if changes were made, but you may not do so in a way that suggests the rights holder has endorsed you or your use of the dataset. Note that further permission may be required for any content within the dataset that is identified as belonging to a third party.

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