MOp BAResq
Published: 19 April 2021| Version 1 | DOI: 10.17632/tmxd37fnmg.1
Contributors:
Xiaoyin Chen, , Description
BARseq experiment in MOp. Contains processed projection data and all necessary scripts to reproduce all analyses. Also contains scripts for processing raw image data. Temporary variables saved during the scripts are also provided, but these are not essential for reproducing the figures. Raw sequencing images are available from Brain Image Library. Bulk sequencing data are deposited at SRA (SRR12247894).
Files
Steps to reproduce
Add all helpers to path. First run M1Pooledanalysis.mlx, then analysis5,ipynb. To run analysis5, jupyter needs to be set up with a matlab kernel.
Institutions
Cold Spring Harbor Laboratory
Categories
Natural Sciences