subSCOPE - a multiomic pan-cancer subtype classifier (Supplementary Data files)

Published: 7 February 2025| Version 1 | DOI: 10.17632/vd6tct9xwr.1
Contributor:
Jasleen Grewal

Description

Supplementary data supporting the Cell Protocols manuscript titled 'subSCOPE - a multiomic pan-cancer subtype classifier'. S1_featurelists.zip : gzipped folder with 5 feature lists, each corresponding to each DATA TYPE used as input for subSCOPE. Related to protocol Step 1(a) in and 'Before you begin' Step 3(a). S2_testfile.txt : Example file that can be used as INPUTFILE for testing subSCOPE. Related to protocol Step 2 and 'Before you begin' Step 3. This is a computer generated example for purposes of demonstration only. S3_outputs.zip: Example of the two output files from subSCOPE when a successful set of predictions is generated. Related to 'Expected Outcomes'.

Files

Institutions

Canada's Michael Smith Genome Sciences Centre

Categories

Genomics, Cancer Diagnostics, Machine Learning

Licence