Dataset of "Extended field-of-view ultrathin microendoscopes for high-resolution two-photon imaging with minimal invasiveness"

Published: 13 October 2020| Version 1 | DOI: 10.17632/wm6c5wzs4c.1
Contributors:
Andrea Antonini, Andrea Sattin, Monica Moroni, Serena Bovetti, Claudio Moretti, Francesca Succol, Angelo Forli, Dania Vecchia, Vijayakumar P. Rajamanickam, Andrea Bertoncini, Stefano Panzeri, Carlo Liberale, Tommaso Fellin

Description

Dataset_1 Data from functional imaging in the VPM using type II eFOV-microendoscopes before and after the removal of the corrective microlens in awake head-restrained mice. - dataset1_description.csv: description of the t-series containing the mouse ID, the type of lens used and the imaging parameters. - TS####.mat: mat-file containing a structure with imaging data - data.A is a num_pixels*num_ROIs array containing the spatial footprints of the ROIs. Each column corresponds to a single ROI and contains positive values for pixels belonging to the corresponding ROI. - data.F_raw is a num_ROIs*num_frames array containing the raw fluorescence activity of the ROIs. Each row corresponds to a single ROI. - data.C_d is a num_ROIs*num_frames array containing the normalized DF_F activity of the ROIs. Each row corresponds to a single ROI. Dataset _2: Data from functional imaging in the VPM using type II eFOV-microendoscopes with the corrective microlens in awake head-restrained mice. Brief dataset description: - TSeries-########-####-####_Mouse_####.mat: mat-file containing a structure with imaging data - data.A is a num_pixels*num_ROIs array containing the spatial footprints of the ROIs. Each column corresponds to a single ROI and contains positive values for pixels belonging to the corresponding ROI. - data.F_raw is a num_ROIs*num_frames array containing the raw fluorescence activity of the ROIs. Each row corresponds to a single ROI. - data.C_d is a num_ROIs*num_frames array containing the normalized DF_F activity of the ROIs. Each row corresponds to a single ROI. Dataset_3: Auxiliary data to generate synthetic t-series. For a complete description of their use, see https://github.com/moni90/eFOV_microendoscopes_sim

Files

Institutions

  • Istituto Italiano di Tecnologia

Categories

Computational Neuroscience, Two-Photon Microscopy

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